Research in Bioinformatics, Machine Learning and Physics

McKinney Lab

In Silico Research Group

The goal of the In Silico Research Group is to extract meaningful biological information from the noise in high-dimensional biological data. We augment standard approaches which may miss interaction effects with machine learning and systems-level network models of integrated data. We are particularly interested in developing systems/network models of human immune response to vaccines and neuropsychiatric disorders.

Our data-driven algorithms draw from the fields of machine learning, information theory, network theory, mathematical modeling, physics, and statistical learning. We develop algorithms to integrate static and time-course data, next-generation sequence, transcriptomic, structural and functional MRI, and genome-wide association data into mechanistic models for disease susceptibility prediction and identification of therapeutic targets.

Principal Investigator

Brett McKinney, Ph.D.